… analysed using the Illumina HiSeq2000 RNA Sequencing Platform (University of North Carolina), expressed as either RPKM or RNA-Seq by Expectation-Maximisati…
TCGA
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Articles mentioning TCGA
34 articles · page 1 of 3….Methods We analyzed clinical LT and HCC resection cohorts from Queen Mary Hospital. In the LT cohort, we evaluated IRI-induced neural alterations …
…ve CROSS regimen.Conclusions While PD-L1 mRNA low GEC tumors in TCGA exhibit lower expression of DC lineage genes, ICD chemoradiothe…
… high expression population (HR=0.66). Figure 1 illustrates the TCGA analysis, comprising ZNF555 expression distribution (IDDF2026-A…
…mmature TLS with primary follicle-like features within the TME. TCGA analyses revealed that FLT3L expression correlates with activat…
Endogenous neoantigen-specific antibodies mediate antitumor responses and determine vaccine efficacy
…ses in the context of cancer vaccination.Results Our pan-cancer TCGA analysis revealed marked heterogeneity in the prognostic impact…
…andomised trial (n=41), a single-cell RNA sequencing cohort and The Cancer Genome Atlas (TCGA) HCC cohort (n=50). Pre-treatment contrast-enhanced CT im…
…an aggressive cancer with limited biopsies thus it is absent in TCGA. We analyzed all 1,925 cancer cell lines in DepMap and found th…
…ated from the Gene Set Enrichment Analysis (GSEA) database. The TCGA cohort was partitioned into training and validation sets. Using…
… expression signature associated with metastatic status in this TCGA cohort. However, due to limited sample size, the model’s genera…
…cross diverse tumor types.Methods Bulk RNA sequencing data from The Cancer Genome Atlas (TCGA) Pan-Cancer cohort (n > 9,000) were analyzed. CD70 expres…
…ming and cytolytic target antigens. In silico analysis with the TCGA dataset found that the targets are both expressed in 97% of pro…