BetaEntity Annotation Prototype
← Back to drugs

Annotated abstract

1140 Wild-derived microbiota enhances the function of intratumor CD8+ T cells

jitc · 2025-11-04 · canonical JSON source

12 visible annotations · policy: published · automated confidence ≥ 75.00%

Document resource

Background Checkpoint blockade immunotherapies (CBIs) transformed cancer treatment, yet benefit only one-third of patients. 1 2 The continuous exposure to natural microbiota modulates anti-tumoral immune responses, with specific bacteria acting as adjuvants for CBIs.3–6 However, the underlying mechanisms remain poorly defined. Specific pathogen-free (SPF) lab mice are inadequate for addressing this question due to limited microbiota diversity and immature immune systems.7 Instead, we utilized C57BL/6 mice with wild-derived microbiota (Wildling mice), which possess immune-experienced, fully mature immune systems.8 Studies using various mouse models with wild-derived microbiota show improved tumor control.9 10 We hypothesized that natural immunity adjuvates CBIs by modulating the activation dynamics of intratumoral CD8+ T cells.Methods To quantify TCR-mediated CD8 + T cell activation dynamics, we implanted poorly immunogenic D4M melanoma cells into SPF or Wildling E8IcrexRosa26LSL-Salsa6f mice, which express the genetically-encoded calcium signaling reporter Salsa6f11 in CD8+ T cells, and performed multiphoton intravital microscopy.12 13 Two mice per group were imaged before and 12h post anti-PD-1 injection. To further assess T cell function, we performed flow cytometry analysis of key functional markers expressed by tumor-associated CD8+ T cells in wild-type SPF and Wildling mice treated with control or anti-PD-1 antibodies, in two independent experiments. Finally, we explored the clinical advantage of the Wildling mice’s natural microbiota compared to SPF mice for tumor growth control and anti-PD-1 response across four independent experiments.Results Intravital imaging of the tumor environment and flow cytometry revealed a statistically significant 9.6-fold increase in tumor-infiltrating CD8 + T cell density in the Wildling mice compared to SPF mice, along with their enhanced TCR activation following anti-PD-1 treatment. Increased intratumor CD8+ T cell activation in Wildling mice correlated with significantly higher IFNγ and Granzyme B expression following anti-PD-1 treatment even in the terminally differentiated Tim3+ CD8+ T cells, which remained unresponsive to PD-1 blockade in SPF mice. Importantly, Wildling mice controlled the growth of poorly immunogenic melanoma better than SPF mice after anti-PD-1 immunotherapy.Conclusions Our findings show that immune experience enhances CD8 + activation to improve immunotherapy-mediated antitumor immune responses. To elucidate the underlying mechanisms, we are currently examining how continuous exposure to diverse microbiota affects memory CD8+ T cell pools, their epigenetic reprogramming, and CD8+ T cell recruitment/reactivation at tumor sites. Understanding these mechanisms will pave the way for innovative strategies to prime patients to CBI responsiveness and improve tumor control.References Larkin J, Chiarion-Sileni V, Gonzalez R, Grob J-J, Rutkowski P, Lao CD, Cowey CL, Schadendorf D, Wagstaff J, Dummer R, et al. Five-year survival with combined nivolumab and ipilimumab in advanced melanoma. New England Journal of Medicine. 2019;381(16):1535–1546.Wolchok JD, Chiarion-Sileni V, Rutkowski P, Cowey CL, Schadendorf D, Wagstaff J, Queirolo P, Dummer R, Butler MO, Hill AG, et al. Final, 10-year outcomes with nivolumab plus ipilimumab in advanced melanoma. New England Journal of Medicine. 2025;392(1):11–22.Davar D, Dzutsev AK, McCulloch JA, Rodrigues RR, Chauvin J-M, Morrison RM, Deblasio RN, Menna C, Ding Q, Pagliano O, et al. Fecal microbiota transplant overcomes resistance to anti-PD-1 therapy in melanoma patients. Science. 2021;371(6529):595–602.Park EM, Chelvanambi M, Bhutiani N, Kroemer G, Zitvogel L, Wargo JA. Targeting the gut and tumor microbiota in cancer. Nature Medicine. 2022;28(4):690–703.Khan MAW, Ologun G, Arora R, McQuade JL, Wargo JA. Gut microbiome modulates response to cancer immunotherapy. Digestive Diseases and Sciences. 2020;65(3):885–896.Routy B, Le Chatelier E, Derosa L, Duong CPM, Alou MT, Daillère R, Fluckiger A, Messaoudene M, Rauber C, Roberti MP, et al. Gut microbiome influences efficacy of PD-1-based immunotherapy against epithelial tumors. Science. 2018;359(6371):91–97.Beura LK, Hamilton SE, Bi K, Schenkel JM, Odumade OA, Casey KA, Thompson EA, Fraser KA, Rosato PC, Filali-Mouhim A, et al. Normalizing the environment recapitulates adult human immune traits in laboratory mice. Nature. 2016;532(7600):512–516.Rosshart SP, Herz J, Vassallo BG, Hunter A, Wall MK, Badger JH, McCulloch JA, Anastasakis DG, Sarshad AA, Leonardi I, et al. Laboratory mice born to wild mice have natural microbiota and model human immune responses. Science. 2019;365(6452):eaaw4361Rosshart SP, Vassallo BG, Angeletti D, Hutchinson DS, Morgan AP, Takeda K, Hickman HD, McCulloch JA, Badger JH, Ajami NJ, et al. Wild mouse gut microbiota promotes host fitness and improves disease resistance. Cell. 2017;171(5):1015–1028.e13.Arnesen H, Hitch TCA, Steppeler C, Müller MHB, Knutsen LE, Gunnes G, Angell IL, Ormaasen I, Rudi K, Paulsen JE, et al. Naturalizing laboratory mice by housing in a farmyard-type habitat confers protection against colorectal carcinogenesis. Gut Microbes. 2021;13(1):1993581.Dong TX, Othy S, Jairaman A, Skupsky J, Zavala A, Parker I, Dynes JL, Cahalan MD. T-cell calcium dynamics visualized in a ratiometric tdTomato-GCaMP6f transgenic reporter mouse. eLife. 2017;6:1–27.Geels SN, Murat C, Moshensky A, Othy S, Marangoni F. Protocol to quantify the activation dynamics of tumor-associated T cells in mice by functional intravital microscopy. STAR Protocols. 2024;5(4):103310.Geels SN, Moshensky A, Sousa RS, Murat C, Bustos MA, Walker BL, Singh R, Harbour SN, Gutierrez G, Hwang M, et al. Interruption of the intratumor CD8+ T cell:Treg crosstalk improves the efficacy of PD-1 immunotherapy. Cancer Cell. 2024;42(6):1051–1066.e7.Ethics Approval This study was approved by the Institutional Animal Care and Use Committee (IACUC) of the University of California Irvine; approval number AUP22-092.